Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | METPAMFIKRCSRSIFLQVVIGLVIGVICGVGIPD------LAVQMKPLGDGFIKLIKMLIALIVFCVVVNGISGAGDLKKVGRIGLKSVIYFEILTTIALVLGLVVAYSLGLGSGANIHLNELPAGDVALYTGRTQEIHGPVAFLMGLIPTSVFSAFAENDILQVLLFSVLFGSALNLV--------GEQASGVARLINEFSHIVFRIMGMIVRLAPLGVFGAVAFTTARYGVDSLSHLGALVLVFYATCLVFVMAVLGSVLRLSGVRMLPFLRYFREELLIVMGTASSDAVLPQVMRKLEHMGIRSSTVGLVIPTGYSFNLDGFSIYLTLAVVFIAHVTGTPLAMTDLITILLVSLVTSKGAHGIPGSALVILAATLTAV-----PAIPVAGLVLVLSVDWFMGIGRALTNLIGNCVATVTIARWENDIDMPRAQAILDGRLEAPAKADGEPLKRSAVAGEGKLHG |
| 1XFH Chain:A ((12-416)) | --------------VLQKILIGLILGAIVGLILGHYGYAHAVHTYVKPFGDLFVRLLKMLVMPIVFASLVVGAASISP-ARLGRVGVKIVVYYLLTSAFAVTLGIIMARLFNPGAGIHLAVGG--------QQFQPHQAPPLVHILLDIVPTNPFGALANGQVLPTIFFAIILGIAITYLMNSENEKVRKSAETLLDAINGLAEAMYKIVNGVMQYAPIGVFALIAYVMAEQGVHVVGELAKVTAAVYVGLTLQILLVYFVLLKIYGIDPISFIKHAKDAMLTAFVTRSSSGTLPVTMRVAKEMGISEGIYSFTLPLGATINMDGTALYQGVCTFFIANALGSHLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLAMVLHSVGLPLTDPNVAAAYAMILGIDAILDMGRTMVNVTGDLTGTAIVAKTEG--------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XFH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -463568 for 3468 contacts (-133.7/contact) +
2D Compatibility (PS) -38971 + (NN) -9655 + (LL) 3764
1D Compatibility (HY) -36800 + (ID) 5300
Total energy: -550530.0 ( -158.75 by residue)
QMean score : 0.362
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