Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSRAARPCNRFCSLLLGLALLMPASLPLSAAETVAPPSPRTLIIDTDPGADDVIALLFAMASPKELKIQALTTVAGNVPLEKTARNARLAREWGKRPDIPVYAGAPRPLLRTPIYAADVHGSEGISGVEVHEPKQPLAEG-NAVDYLIRTLRAAPEKSVTLAMLGPETNLALALTQAPDIVKGVREIVIMGGAHFNGGNITPAAEFNIFADPHAAEIVLKSGAPITMLPLDVTHKILTSPERIAKLRNLGNQAGKTVADILDAYVQYDIKYYGLKGGPVHDATVVAYLLKPSLFKGKRINVQVDSREGITFGQTVADWYGGLKQPANVEWINEGDAQGFFDLLTERIARLP
1Q8F Chain:C ((4-306))---------------------------------------RKIILDCDPGHDDAIAIMMAAKHPA-IDLLGITIVAGNQTLDKTLING-LNVCQKLEINVPVYAGMPQPIMRQQIVADNIHGDTGLDG-PVFEPLTRQAESTHAVKYIIDTLMAS-DGDITLVPVGPLSNIAVAMRMQPAILPKIREIVLMGGA-YGTGNFTPSAEFNIFADPEAARVVFTSGVPLVMMGLDLTNQTVCTPDVIARMERAGGPAGELFSDIMNFTLKTQFENYGLAGGPVHDATCIGYLINPDGIKTQEMYVEVDVNSGPCYGRTVCDELGVLGKPANTKVGITIDTDWFWGLVEECVRGYI


General information:
TITO was launched using:
RESULT:

Template: 1Q8F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -146318 for 2903 contacts (-50.4/contact) +
2D Compatibility (PS) -32945 + (NN) -24391 + (LL) 2792
1D Compatibility (HY) -27200 + (ID) 6400
Total energy: -234462.0 ( -80.77 by residue)
QMean score : 0.558

(partial model without unconserved sides chains):
PDB file : Tito_1Q8F.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1Q8F-query.scw
PDB file : Tito_Scwrl_1Q8F.pdb: