Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKHRRTQSRMSVLRRLAAVLGLGACALAAEAAEPLKIGFVYVGPVGDHGWTYQHELGRRELVEHFGDKVKTSFVENVAEGADAERVIRNLAKDGYGLVFTTSFGYMNPTAKVARQFPKVTFEHATGYKRD-RNLGTYLSRSYEGRYVGGFLAAKMTRSHKIGYIASFP-IPEVIRDINAIQLALDKYDPQAELKVMWVSTWFDPGKEADAANALID--QGVDVVFQHTDSPA--PIQAAERRG------VYAVGYASDMQHFGPKTVLTSIVNDWGPHYIRSAQAVMDGTWKSEDFWGGLAESTVVLPLNQEVLPAPVREEAGRLIESIRSGAFHPFTGPIRDQSGKERFAAGVSATKADLASMNYYVEGIKADLPK |
1QPZ Chain:A ((56-305)) | -------------------------------NHTKSIGLLATSS--EAAYFAEIIEAVEKNCFQK-G-YTLILGNAWNNLEKQRAYLSMMAQKRVDGLLVMCSEYPEPLLAMLEEYRHIPMVVMDWGEAKADFTDAVIDNAFEGGYMAGRYLIERG-HREIGVIPGPLERNTGAGRLAGFMKAMEEAMIKVPESWIVQGDF-EPESGYRAMQQILSQPHRPTAVFCGGDIMAMGALCAADEMGLRVPQDVSLIGYDNVRNARYFTPALTTIHQPKDSLGETAFNMLLDRIVNKREEPQSIEVHPRLIERRSVADGPFRDYR-------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QPZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -94808 for 1990 contacts (-47.6/contact) +
2D Compatibility (PS) -26027 + (NN) -9409 + (LL) 6172
1D Compatibility (HY) -5600 + (ID) 1400
Total energy: -131072.0 ( -65.87 by residue)
QMean score : 0.457
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