Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMSPNGSLKFASQAVAKPYFVFALILFVGQILFGLIMGLQYVVGDFLF-------PAIPFNVARMVHTN-LLIVWLLFGFMGAAYYLVPEESDCELYSPKLAWILFWVFAAAGVLTILGYLLV-------PYAGLARLTGNELWPTMGREFLEQPTISKAGIVIVALGFLFNVGMTVL-RGR------KTAISMVLMTGLIGLALLFLFSF------------Y---NPENLTRDKFYWWWVVHLWVEGVWELIMGAILAFVLVKITGVDREVIEKWLYVIIAMALISGIIGTGHHYFWIG-VPGYWLWLGSVFSALEPLPFFAMVLFAFNTI------NRRRR-----RDYPNRA-VALWAMGTTVMAFLGAGVWGFMHTLAPVNYYTHGTQLTAAHGHMAFYGAYAMIVMTIISYAMPRLRGIGEAMDNRSQVLEMWGFWLMTVAMVFITLFLSAAGVLQVWLQRMPADGAAMTFMATQDQLAIFYWLREGAGVVFLIGLVAYLLSFRRGKAAA |
| 3S8F Chain:A ((20-495)) | -------EAYPEKKATLYFLVLGFLALIVGSLFGPFQALNYGNVDAYPLLKRLLPFVQSYYQGLTLHGVLNAIVFTQLFAQAIMVYLPARELNMRPN-MGLMWLSWWMAFIGLVVAALPLLANEATVLYTFYPPLKG-----------H---WAFYLGASVFVLSTWVSI-YIVLDLWRRWKAANPGKVTPLVTYMAVVFWLMWFLASLGLVLEAVLFLLPWSFGLVEGVDPLVARTLFWWTGHPIVY-FWLLPAYAIIYTILPK-QAGGKLVSDPMARLAFLLFLLLSTPVGFHHQFADPGIDPTWKMIHSVLTLFVAVPSLMTAFTVAASLEFAGRLRGGRGLFGWIRALPWDNPAFVAPVLGLLG-FIPGGAGGIVNASFTLDYVVHNTAWVPGHFHLQVASLVTLTAMGSLYWLLPNLTG--KPISDAQRRLGLAVVWLWFLGMMIMAVGLHWAGLL-----NVPRRAYIAQVPDAYPHAAVPMVFNVLAGIVLLVALLLFIYGLFSVLLSR |
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General information:
TITO was launched using:
| RESULT:
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Template: 3S8F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -522626 for 3673 contacts (-142.3/contact) +
2D Compatibility (PS) -43959 + (NN) -19305 + (LL) 1816
1D Compatibility (HY) -27600 + (ID) 3700
Total energy: -615374.0 ( -167.54 by residue)
QMean score : 0.296
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