Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLPAMRTGLLCALLGVTAPAWAEYVTVISFGGANKEAQETAFYKPFKSATGNRVVHGSY-NGDLAKLKRMVEISHVSWDVVEV-EAPELARGCEEGLFEKLDMAKVGDPADFVP----GA-VQPCGVGIFVWTTLLAYNPGKVAGSPQGWADFWDVKKFPGKRGLRWGAKYSLEFALMADGVAPKDVYQTLATPAGVERAFRKLDELKPYI-H-WWKSGQDPVRDLADGTVVMSSAYNGRIAAAQAE---------KQRLAMVWS----GGVYDFDFWALPVGVWKKQLAEEFIRFASQPEQQKAFAENIAYGPANRKAVGLLDPQVAANLPTAPQNMQNAVGMNVAFWAEHGEALEQRFQNWAKR |
| 1Y9U Chain:A ((6-320)) | ----------------------DEVSLYTTRE---PKLIQPLLDAFAKDSGIKVNTVFVKDGLLERVRAEG-DK-SPADVLMTVDIGNLIDLVNGGVTQKIQSQTL---DSVVPANLRGAEGSWYALSL--RDRVLYVEKDLKL-DSFRYGDLADPK-WKGKVCIRSGQHPYNTALVAAM-IA----------HDGAEATEKWLRGVKANLARKAAGGDRDVARDILGGICDIGLANAYYVGHMKNAEPGTDARKWGDAIKVVRPTFAGGTHVNISGAAVAAHAPNKANAVKLLEYLVSEPAQTLYAQANYEYPVRAGVK--LDAVVA-SFGP----L-KVDTLPVAEIAKYRKQASELVDKVGFD |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Y9U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -95995 for 2474 contacts (-38.8/contact) +
2D Compatibility (PS) -31742 + (NN) -13187 + (LL) 2920
1D Compatibility (HY) -5600 + (ID) 2450
Total energy: -146054.0 ( -59.04 by residue)
QMean score : 0.404
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