Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQPFAIAPSILSADFARLGEDVDKVLAAGADIVHFDVMDNHYVPNLTIGPMVCSALRKYGVSAPIDVHLMVSPVDRIIGDFIEAGATYITFHPEASQHIDRSLQLIRDGGCKAGLVFNPATPLEVLKYVMDKVDMVLLMSVNPGFGGQKFIPGTLDKLREARALIDASGREIRLEIDGGVNVKNIREIAAAGADTFVAGSAIFNAPDYAEVIRAMHAELAQAHQ
2FLI Chain:H ((3-218))
--TLKIAPSILAADYANFASELARIEETDAEYVHIDIMDGQFVPNISFGADVVASMRKHS-KLVFDCHLMVVDPERYVEAFAQAGADIMTIHTESTRHIHGALQKIKAAGMKAGVVINPGTPATALEPLLDLVDQVLIMTVNPGFGGQAFIPECLEKVATVAKWRDEKGLSFDIEVDGGVDNKTIRACYEAGANVFVAGSYLFKASDLVSQVQTLRTAL-----
General information:
TITO was launched using:
RESULT:
Template:
2FLI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -195141 for 1912 contacts (-102.1/contact) +
2D Compatibility (PS) -23378 + (NN) -8993 + (LL) 1092
1D Compatibility (HY) -21600 + (ID) 4550
Total energy: -252570.0 ( -132.10 by residue)
QMean score : 0.728
(partial model without unconserved sides chains):
PDB file :
Tito_2FLI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FLI-query.scw
PDB file :
Tito_Scwrl_2FLI.pdb
: