Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------MSGYAE-RATTRRRQAGFTLIEVMVAIM-----LMAIVSLM-------------AWRGLDSIARASAH--------------LEDSTEQGAALLRALNQLERDIALHS-AIREE--------TGLPSGDEPIRAGDSLPPGLALKRLSEIPLRLDIVRASTEP-GAPLQRVRWWRQGKVLYRAAS--------PSGDRLPLPP------LAERVAVLDD------VSRFD-IRAWVPGKGWTRLPARSKVRASGLEISLARVTRNGVERYRRVVALQ--- |
| 3GN6 Chain:A ((22-321)) | FNPWTDAALDTIVNQALTLYAEMRVVPAHHDAFLAAIDTVSAKLRVLPGFLSLALKQMSGDSTMVKNYPETYKGVLATAYLDGVAAGTQPYFYNLFVRFADGRAARAAGFEALFETHIHPLLHAMADGPELLAYRAVLQSVVAGDRHAIYRGAEEIRSFLRRPVELPER-ETVTVENHVMVPEDKHAAWEPQVAILLQVAQDTFEPQDEPSGVGLPGARDNRYYRKALSTEILRNAHADGGLRAYIMHGVWESVWDHENSHLDPRFLAAAGPVG-AAAVVGPVEPFYLTRRLVVAD |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GN6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -14739 for 1449 contacts (-10.2/contact) +
2D Compatibility (PS) -21837 + (NN) -1497 + (LL) 352
1D Compatibility (HY) -800 + (ID) 2150
Total energy: -40671.0 ( -28.07 by residue)
QMean score : 0.207
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