Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLRASFVLLALSCAAPLLSLAEPLRFAGD-DGCPYLCPG-TPQRPGYLVEALSQVLR-E-----PPHFDSLPWPRAVQMVRDGHRDGLVG-AYGL----DGLRVGSEPIGWVGLAFYTRHDSDWHYSGDASLLGQRLGLAQGYVNNPRFEAWRSQAGDDDLHLQVLGGERVLPRNLQKLLLGRIDVLLEDRDIIEHYLEHHPQLAGQIRRAGE-LPGRQPLHVGLSPHLPEVDARLAELDEGLRQLRREGTLKVLGERYRLSFE |
| 2YJP Chain:A ((52-278)) | ------------------KEKGVIRIGVFGDKPPFGYVDANGKNQGFDVEIAKDLAKDLLGSPDKVEFVLTEAANRVEYVRSGKVDLILANFTQTPERAEAVDFA-DPYMKVALGVVSPKNKP--ITDMAQLKDQTLLVNKGTTADAFFTKSHP--E-----VKLLK-FDQNTETFDALKDGRGVALAHDNALLWAWAKENP----NFEVAIGNLGPAEFIAPAVQKG---NADLLNWVNGEIAAMKKDGRLKAAYEKTLLPVY |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YJP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -84648 for 1732 contacts (-48.9/contact) +
2D Compatibility (PS) -22762 + (NN) -9328 + (LL) 2788
1D Compatibility (HY) -6800 + (ID) 1800
Total energy: -122550.0 ( -70.76 by residue)
QMean score : 0.375
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