Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPDTLRHARVIILGSGPAGYSAAVYAARANLKPLLITGMQA-----GGQLTTTTEVDNWPGDPHGLTGPALMQRMQEHAERFETEIVFDHIHAVDLAGKPFTL----RGDNGTYTCDALIVATGASARYLGLPSEQAFMGKGVSACATCDGF--FYRNREVAVIGGGNTAVEEALYLANIASRVTLVHRRETFRAEKILQDKLQARVAEGKIVLKLNAEVDEVLGDTMGVTGVRLK-TRDGGSEEIAVDGMFVAIGHTPNTSLFEGQLALKD-GYLVVNGGREGNATATNVPGVFAAGDVADHVYRQAITSAGAGCMAALDVERYLDSL |
| 3ITJ Chain:B ((22-337)) | ------HNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGSELMDRMREQSTKFGTEIITETVSKVDLSSKPFKLWTEFNEDAEPVTTDAIILATGASAKRMHLPGEETYWQKGISACAVCDGAVPIFRNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRASTIMQKRAEKN---EKIEILYNTVALEAKGDGKLLNALRIKNTKKNEETDLPVSGLFYAIGHTPATKIVAGQVDTDEAGYIKTVPG----SSLTSVPGFFAAGDVQDSKYRQAITSAGSGCMAALDAEKYLTSL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ITJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -245615 for 2719 contacts (-90.3/contact) +
2D Compatibility (PS) -32600 + (NN) -7560 + (LL) 712
1D Compatibility (HY) -24800 + (ID) 7600
Total energy: -317463.0 ( -116.76 by residue)
QMean score : 0.514
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