Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPIHNLNHVNMFLQVIASGSISSAARILRKSHTAVSSAVSNLEIDLCVELVRRDGYKVEPTEQALRLIPYMRSLLNYQQLIGDIAFNLNKGPR-NLRVLLDTAIPPSFCDTVSSVLLDDFNMVSL--IRTSPADSLATIKQDNAEIDIAITIDEELKISRFNQCVLGYTKAFVVAHPQHPLCNASLHSIASLANYRQISLGSRSGQHS----NL-LRPVSD-KVLFVENFDDMLRLVEAGVGWGIAPHYFVEERLRNGTLAVLSELYEPGGIDTKVYCYYNTAL---ESERSFLRFLESARQRLRELGRQRFDDAPAWQPSIVETAQRRSGPKALAYRQRAAPE |
| 1AL3 Chain:A ((88-296)) | ----------------------------------------------------------------------------------------TWPDKGSLYVATTHTQARYALPGVIKGFIERYPRVSLHMHQGSPTQIAEAVSK--GNADFAIATEALHLYDDLVMLPCYHWNRSIVVTPEHPLATKGSVSIEELAQYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGVGVIASMAVDP-VSDPDLVKLDAN--GIFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVVDTAVALRSNEDIEAMFKDIKLPEK-------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1AL3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -116955 for 1533 contacts (-76.3/contact) +
2D Compatibility (PS) -20958 + (NN) -8775 + (LL) 8208
1D Compatibility (HY) -5600 + (ID) 1600
Total energy: -145680.0 ( -95.03 by residue)
QMean score : 0.333
|
|
|