Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKILPVPMLAAGLALLPSFAQAEFFADGKAGLELRNFYFNRDYRQPGASQSYSEEWAQGFLLRYESGYTEGLFGLGVDALGLLGVRLDSSPERSGSGLLPYSTSDRRAAHDYSSLGLTAKLRVSHSTLKIGTLMPRLPVVQFNDTRLHPQTFQGGLLEVNEIDGLALQFGQLRQVKQRDSTNAEDLGITRGNKRNVLAGRHPG-SDRFDFAGGTYRWS-ERLSSSYHYANLEDFYRQHHLGVQHLLPLADDQSLKSDIRWARSTDEGGSR---VNNRALNALFTYRLGGHAFGLGYQRMSGDSGFAYLAGTDP-YLVNFVQIGDFANKDERSWQLRYDYDFAAIGLPGLTFMSRYLRGEHIDLLDGGGRGKEWERDTDIAYLVQSGPLKNLGIKLRNGTFRSDFGND-IDETRLIVSYALPLW |
4FMS Chain:A ((9-396)) | -----------------------FLEDAKASLTARNFHLHRNFVG------KAEEWTQSFILDARSGFTQGSVGFGLDVLGLYSLKLD--------------------ADDFGRLAVAGKLRVSNSELKIGEWMPVLPILRSDDGRSLPQTFRGGQLSANEIAGLTLYAGQFRGNSPRNDASMQDM---------SLFGRPAATSDRFDFAGGEYRFNGERSLLGLWNAELKDIYRQQYLQLQHSQPLGD-WLLGANLGGFRGRDAGSARAGKLDNRTVSALFSARYGLHTLYLGLQKVSGDDGWMRVNGTSGGTLANDSYNASYDNPGERSWQLRYDFDFVGLGLPGLTFMTRYLHGDHVRLAGVTDDGSEWGRESELGYTLQSGAFKRLNVRWRNSSQRRDW---RFDENRLIVSYPLSLL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FMS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -32710 for 2779 contacts (-11.8/contact) +
2D Compatibility (PS) -36122 + (NN) -796 + (LL) 1896
1D Compatibility (HY) -27200 + (ID) 8300
Total energy: -103232.0 ( -37.15 by residue)
QMean score : 0.221
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