Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSRFEIAFSGQLVAGARPEVVKANLAKLFQADAQRIELLF-----SGRRVVIKNNLDAASAEKYRSVLERA------GAIAVVAEMEVEEVVMAPPPAQTTPVEAPQTRAATGTSAPAGRLQVAPRDGYMAAFAEVDAPDFGLAPVGADLQDAKAEAEAPKLDLSRFSVAPVGSDMGQARSEPAAPAPDTSHLRLQD |
3O1F Chain:A ((27-105)) | --MYKVILVND--DYTPMEFVIDVLQKFFSYDVERATQLMLAVHYQGKAICGV-F-TAEVAETKVA-VNKYARENEHPLLCTLEKA--------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3O1F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -27288 for 424 contacts (-64.4/contact) +
2D Compatibility (PS) -7334 + (NN) -2733 + (LL) 7124
1D Compatibility (HY) -4000 + (ID) 600
Total energy: -34831.0 ( -82.15 by residue)
QMean score : 0.675
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