Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFKHIIARTPARSLVDG--LTS---SH-----------L---GKPDYAKALEQHNAYIRALQTCDVDITLLPPDE-----RFPD-------SVFVEDPVLCTSRCAIITRPGAESRRGETEIIEETVQRFYPG---------------------KVER---------------IEAPGTVEAGDIMMVGDHFYIGESARTNAEGARQMIAILEKHGLSGSVVRL--EKVLHLKTGLAYLEHNNLLAAGEFVSK--PEF--QDFNIIEIP-----EEES-------YAANCIWVNE-RVIMPAGYPRTREKIARLGYRVIEVDTSEYRKIDGGVSCMSLRF |
| 1JDW Chain:A ((74-412)) | PLEEVIVGRAENACVPPFTIEVKANTYEKYWPFYQKQGGHYFPKDHLKKAVAEIEEMCNILKTEGVTVRRPDPIDWSLKYKTPDFESTGLYSAMPRDILIVVGNEIIEAPMAWRSRFFEYRAYRSIIKDYFHRGAKWTTAPKPTMADELYNQDYPIHSVEDRHKLAAQGKFVTTEFEPCFDAADFIRAGRDIFAQRSQVTNYLGIEWMRRHLAP-DYRVHIISFKDPNPMHIDATFNIIGPGIVLSNPDRPCHQIDLFKKAGWTIITPPTPIIPDDHPLWMSSKWLSMNVLMLDEKRVMVDANEVPIQKMFEKLGITTIKVNIRNANSLGGGFHCWTCDV |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JDW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -125235 for 1943 contacts (-64.5/contact) +
2D Compatibility (PS) -26636 + (NN) 1888 + (LL) 44
1D Compatibility (HY) -16000 + (ID) 2250
Total energy: -168189.0 ( -86.56 by residue)
QMean score : 0.668
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