Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MARKNAVKDNLEQIQHQSYSELQELLSEANSMLADSAAFAGDKADSARARIGALLEKANDALGKGGSAVAERSRHAVDATESYIGANPWQTVAITTAVGLLAGFLLGRRS
1G8Q Chain:A ((113-202))
FVNKDQIAKDVKQFYDQALQQAVV----------------DDDANNAKAVVKTFHETLDCC-GSSTLTALTTSVLKNNLCPS--GSNIISNLFKEDCHQKIDDLFSGKH-
General information:
TITO was launched using:
RESULT:
Template:
1G8Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 17633 for 618 contacts (28.5/contact) +
2D Compatibility (PS) -9728 + (NN) -4266 + (LL) 1896
1D Compatibility (HY) -1600 + (ID) 700
Total energy: 3235.0 ( 5.23 by residue)
QMean score : 0.406
(partial model without unconserved sides chains):
PDB file :
Tito_1G8Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1G8Q-query.scw
PDB file :
Tito_Scwrl_1G8Q.pdb
: