Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALVDGFLELERSSGKLEWSAILQKMASDLGFSKILFGLLPKDSQDYENAFIVGNYPAAWREHYDRAGYARVDPTVSHCTQSVLPIFWEPSIYQTRKQHEFFEEASAAGLVYGLTMPLHGARGELGALSLSVEAENRAEANRFMESVLPTLWMLKDYALQSGAGLAFEHPVSKPVVLTSREKEVLQWCAIGKTSWEISVICNCSEANVNFHMGNIRRKFGVTSRRVAAIMAVNLGLITL
3IX8 Chain:B ((6-167))
-----GFLELERSSGKLEWSAILQKMASDLGFSKILFGLLPKDSQDYENAFIVGNYPAAWREHYDRAGYARVDPTVSHCTQSVLPIFWEPSIYQTRKQHEFFEEASAAGLVYGLTMPLHGARGELGALSLSVEAENRAEANRFMESVLPTLWMLKDYALQSGAGLAF------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3IX8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -98576 for 1257 contacts (-78.4/contact) +
2D Compatibility (PS) -17291 + (NN) -5039 + (LL) 6512
1D Compatibility (HY) -22800 + (ID) 8100
Total energy: -145294.0 ( -115.59 by residue)
QMean score : 0.648
(partial model without unconserved sides chains):
PDB file :
Tito_3IX8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IX8-query.scw
PDB file :
Tito_Scwrl_3IX8.pdb
: