Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSKPTVRVLALLELLQS---HGQLSGSELARRLEVDGRTLRRYIVALEELGIPISAERGRHGGYRLVAGFKLPPLMFSAEETLAVSLGLLAVRSLGLGESELALESAQAKLSRVMPVALRRRLVALRETASLDLARARAGTSVAALATLAEAAQVRARVEFRYRDPQGAETLRQLDPYGLAYRNGCWYVSGFCHLRQALRSFRLDRLDAPRMLAERFERPADFDTLRHLRESFARMPRAYPVEILMRAAREQVVAVLGEPLGLLAEVDGGTLLRASTDDLDWFARRLCGLPFDFEVRQPLELREPLRRQAERVLRNLGQEEASDHR |
2Y75 Chain:A ((8-71)) | ----GRYGLTIMIELAKKHGEGPTSLKSIAQTNNLSEHYLEQLVSPLRNAGL-VKSI----GGYVLGSEPDAITAGDIIRVLEGPISPVEVLEDEEPAKRELWIRIRDAVKEVLDSTTLEDLASYTD------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y75.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -45547 for 350 contacts (-130.1/contact) +
2D Compatibility (PS) -6251 + (NN) -3820 + (LL) 17520
1D Compatibility (HY) -2400 + (ID) 600
Total energy: -41098.0 ( -117.42 by residue)
QMean score : 0.669
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