Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPDITQAAIVTGASRGIGRAIARRLAADGFAVAVNYASNQAMADEVVAEIVAAGGAAIAVQGDVASAEDMDKLFEATRGAFGRIDVVVNSAGTMPYLKIADGDLEGFDRVIRTNLRGAFIVLGLAARHVERGGRIIALSTSVIAR--ALPSYGPYIASKSGVEGLVHVLANELRGQDIRVNAVAPGPVATELFF--------NGKS--AEQIDQI-ARLAPLERLGEPDEIAAAVSFLAGPDGAWVNSQVLRVNGGFA |
| 4FJ2 Chain:D ((19-270)) | -----KVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIV-LTSSNTSKDFSVPKHSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQDVANVVGFLVSKEGEWVNGKVLTLDGGAA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FJ2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -150044 for 2076 contacts (-72.3/contact) +
2D Compatibility (PS) -26052 + (NN) -8776 + (LL) 392
1D Compatibility (HY) -15600 + (ID) 4900
Total energy: -204980.0 ( -98.74 by residue)
QMean score : 0.531
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