Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------MTLKLVQTLAGLLGEGESGKAEVLAVKEGLANNFQVLLKLTLANSGQSLVEVQSNRPLVPGNLLNVSATSNTSVVATLLDSMAGAGPLSSLDLEQLPPGTLLQGKVLSSTALPADKAQQVVYRVLLNLLNTPLAGSKLSLDSPQALPVGSLLTALV-KNSQQIDFLPLS-GRLDQLALGQQLAGQSARQASLEGLFAALQGLNGRNDLPDSLRQAVERLFAGLPEAQKMGDSKLLGQALQQSGLFL-EARLMQGATDHLGHDLKANLLRLFAQLSPLPPTGAQAPGMFAGNTANLAQAL--PAFVRNALGNLGQSANKTQALNFPLPSKVLQLFDEDMELESLLRLAAAAISRLQTHQLSSLAQTSTLPDGTQLATWQMEVPMRHQHSVVPLQVKFQEEQRKTGEEARESLWRVELAFDLEPLGPLHAQATLLRGSLSSQLWAERDATARLVEHELGHLRQRLRDAGLTVGEITCQRGRPPQGPRATIEQRWVDETA |
| 3FGA Chain:B ((1-403)) | PPADQEKLFIQKLRQCCVLFDFVSDPLSD-LKWKEVKRAALSEMVEYITHNRNV-----------------------ITEPIYPEVVHMFAVNMFRTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFVLQLLELFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMFLNELEEILDVIEPSEFVKIMEPLFRQLAKCVSSPHFQVAERALYYWNN----EYIMSLISDNAAKILPIMFPSLYRNSK-------THWN--------------------------KTIHGLIYNALKLFM----------------EMNQKLFDDCTQQFKAEKLKEKLKMKEREEAWVKIENL------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FGA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -32648 for 2771 contacts (-11.8/contact) +
2D Compatibility (PS) -41780 + (NN) -22050 + (LL) 6344
1D Compatibility (HY) -16800 + (ID) 3050
Total energy: -109984.0 ( -39.69 by residue)
QMean score : 0.291
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