Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLAQFTPSALADLANCVLRIPLALQQPSSVAMTLPSLTSFMPHFGAPALLLLQLLAALPATAAETDATPLRFSVMESWSMPLVRLQRGQPIDGIVYDITRSLARQVGRKALYHPYP-RGRIEQAMNAGEIDVRCYISPAWLSHDFPGYRWSVALLVQRDILVAREGFA--PIPEALPAQRIGTVLGYSYPR-LQALFDIGRLRRDDARTQDLVLEKLRAGRYRYAVSHQLSLHWSNRQAPGQPPLQEAA-QLEETAVSCMVRDSAEVPVEAILKTFEEMKRSGEIEEILQRYR |
| 3MPK Chain:A ((26-251)) | -------------------------------------------------------------QWMADHPVVKVAVL-NLFAPFTLFRTDEQFGGISAAVLQLLQLRTGLDFEIIGVDTVEELIAKLRSGEADMAG--ALFVNSARESFLSFSRPYVRNGMVIVTRQDPDAPVDADHLDGRTVALVRNSAAIPLLQRRYP--QAKVVTADNPSEAMLMVANGQADAVVQTQISASYYVNRYFAGKLRIASALDLPPAEIALATTRGQTELMSILNKALYSISN-DELASIISRWR |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MPK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -134080 for 1777 contacts (-75.5/contact) +
2D Compatibility (PS) -23496 + (NN) -9358 + (LL) 5676
1D Compatibility (HY) -6400 + (ID) 1500
Total energy: -169158.0 ( -95.19 by residue)
QMean score : 0.417
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