Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAFLLIGLSEHRPLPLGQGSPLRWLALLFGLLAWHAGAGERVIYPRHSEGRNPEPYVVELLQLALAR-SGGDYRLEPSAQPMPQSRAQLRLEQDDPGLQVMWA-QS-RDDLEETLLPIRIPIYRGLIGWRIPLVSAANKDILASARTLDDLRRLRFGQRQDWADTPILRAN-GL-EVKTSQNYESLFRMLDAGRFEVFPREVVVIDGELEDASRAGLHLAIDQHLALHYPAAFYFFVSRQRPELAEAIRQGLEKAIADGSFERLFERHFKTRLEKLALRQRRIIELKNPYLPGKTPFQREALWYRP |
| 3VV5 Chain:A ((52-256)) | ----------------------------------------------FDERNQLTGFEVDLGNAIAERLGL---KPRWI--AQSFDTLLIQLNQG--RFDFVIASHGITEERARAVDFT-NPHYCTGG---VIVSRKGG------PRTAKDLQGKVVGVQVGTTYMEAAQKIPGIKEVRTYQRDPDALQDLLAGRIDTWITDRFVAKEAIKERKLE-NTLQVGE-L--VFQERVAMAVAKGNKSLLDALNRALAELMQDGTYARISQKWFGEDVRCK------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VV5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -90746 for 1524 contacts (-59.5/contact) +
2D Compatibility (PS) -21539 + (NN) -4973 + (LL) 6552
1D Compatibility (HY) -3600 + (ID) 1700
Total energy: -116006.0 ( -76.12 by residue)
QMean score : 0.477
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