Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKTHLFDLDGKIAFVSGASRGIGEAIAKLLAQQGAHVIVSSRKIDGCQAVADAITAEGGKAT-AIACHIGEMEQIQNVFAQIREQFGRLDILVNNAATNPQFCNVLETDLGAFQKTVDVNIRGYYFMSIEGGKLMKEHGGGSIINVASINGVSPGEFQGI--YSVTKAAVISMTKVFAKECAQFGIRCNALLPGLTDTKFASALVKNDAIRNLALQRIPLKRVAEPSEMAGAVLYLASEASSYTTGVALNVDGGFLS
1VL8 Chain:B ((16-264))-----VFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRH-PAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLT-VEEVTMPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLASEEAKYVTGQIIFVDGGWTA


General information:
TITO was launched using:
RESULT:

Template: 1VL8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -148852 for 2140 contacts (-69.6/contact) +
2D Compatibility (PS) -26604 + (NN) -6783 + (LL) 224
1D Compatibility (HY) -20400 + (ID) 4500
Total energy: -206915.0 ( -96.69 by residue)
QMean score : 0.532

(partial model without unconserved sides chains):
PDB file : Tito_1VL8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VL8-query.scw
PDB file : Tito_Scwrl_1VL8.pdb: