Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAFDAARYVHRYYASLAPAPGNEYPRLRAWEYLWEYVWDPSRSWDDLTAPEQLD-TTALHLG-FYLANWGMFRGSSGLLQNSN-LDLMKALARQLFSGA---GPELFELSL-----------------VDFAGNGARLAHNRKLLETVLGSMDALSSRVSWTDTLKSKILLGVWGE--FPALDRHYVAACRALYPRRGLTSVNGGTLTA-LHRL--IGEERLSFPRLE--TARKGLLYPTGRLAD---MAFFQYGLENA-- |
| 2PNN Chain:A ((11-258)) | ------LYDRRSIFDAVAQSN-----CQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHN-GQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGL-TPLALAASSGKIGVLAYILQREIH |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PNN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -68099 for 1558 contacts (-43.7/contact) +
2D Compatibility (PS) -21690 + (NN) -1221 + (LL) 1104
1D Compatibility (HY) -5600 + (ID) 2050
Total energy: -97556.0 ( -62.62 by residue)
QMean score : 0.069
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