Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQFGAKPLFENVSVKFGNGNRYGLIGANGCGKSTFMKILGNDLEPSAGQVMLEPNVRLGKLRQDQFAYEDFSVIDTVIMGHEELWAVKAERDRIYSLPEMSEADGMAVAELEVQFAEFDGYTAESRAGELLLGLGIPLEQHFGPMSAVAPGWKLRVLLAQALFSDP--DVLLLDEPTNHLDINTIRWLEGVLTAR---NSTMIIISHDRHFLNSVCTHMADL------DYGELRLFPGNYDEYMTAAEQARERLLSDNAKKKAQIAELQSFVSRFSANASKAKQATSRARQIDKIQLEEVKPSSRVSPFIRFEQYKKLHRQAVTVENISKGYDGKPLFKGLSLQVEAGERVAIIGPNGIGKTTLLRCLVGDLPV---------------------DGGEVKWTDSA-----------DVGYFAQDHADDF------------------------------------------------------------------------ADDMSLFDWMAQWTQGG-EQLVRGTLGRMLFSNDEIKKSVKVISGGEQGRMLFGRLILKRP---NVLVMDEPTNHLDMESIEALNLALDNY---PGTLIFVSHDREFVSSLATRIIELG------ENGVTDFSGSYDDYLRSQGVIV |
| 2R6F Chain:A ((487-942)) | ---------------------------------------------------------------------------------------------------------------------------------FLQNVGLDYLTLSRSAGTLSGGEAQRIRLATQIGSRLTGVLYVLDEPSIGLHQRDNDRLIATLKSMRDLGNTLIVVEHDEDTMLA-ADYLIDIGPGAGIHGGEVVA-AGTPEEVMNDPNSLT-----------------GQYLS--------------------GKKFIPIPAE-----------RRRPDGRWLEVVGAR-----EHNLKNVSVKIPLGTFVAVTGVSGSGKSTLVNEVLYKALAQKLHRAKAKPGEHRDIRGLEHLDKVIDIDQSPIGRTPRSNPATYTGV-FDDIRDVFASTNEAKVRGYKKGRFSFNVKGGRCEACHGDGIIKIEMHFLPDVYVPCEVCHGKRYNRETLEVTYKGKNIAEVLDMTVEDALDFFASIPKIKRKLETLYDVGLGYMKLGQPATTLSGGEAQRVKLAAELHRRSNGRTLYILDEPTTGLHVDDIARLLDVLHRLVDNGDTVLVIEHNLDVIK-TADYIIDLGPEGGDRGGQIVA-VGTPEEVAEVKESHT |
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General information:
TITO was launched using:
| RESULT:
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Template: 2R6F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -112882 for 2594 contacts (-43.5/contact) +
2D Compatibility (PS) -35241 + (NN) -11231 + (LL) 12504
1D Compatibility (HY) -15200 + (ID) 3450
Total energy: -165500.0 ( -63.80 by residue)
QMean score : 0.327
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