Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTTRTSPAPAGLLRPSLHCLAFAVALGSAGAALAKDVTWEDIANDDKTTGDVLQYGMGTHAQRWSPLKQVNADNVFKLTPAWSYSFGDEKQRGQESQAIVSDGVIYVTASY-SRLFALDAK-TGKRLWTYNHRLPDDIRP--CCDVVNRGAAIY--GD----KVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEG-----HMGRLNGKDSTVTGD--VKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQYLGVTVGYGGAVPLWGGDMADLTRPVAQGGSFWVFKLPSWDNRTASR |
| 4TQO Chain:E ((23-556)) | ------------------------------------------------------------ATHFSRLTEINSHNVKNLKVAWTLSTG--TLHGHEGAPLVVDGIMYIHTPFPNNVYAVDLNDTRKMLWQYKPKQNPAARAVACCDVVNRGLAYVPAGEHGPAKIFLNQLDGHIVALNAKTGEEIWKMENSDIAMGSTLTGAPFVVKD----KVLV--GSAGAELGVRGYVTAYNIKDGKQEW-RAYATGPDEDLLLDKDFNKDNPHYGQFGLGLSTWEGD---------AWKIGGGTNWGWYAYDPKLDMIYYGSGNPAPWNETMRPG--------DNKWTMTIWGRDADTGRAKFGYQKTPHDEWDYAGVNYMGLSEQEV-DGKLTPLLTHPDRNGLVYTLNRETGALVNAFKIDDTVNWVKKVDLKTGLPI-----RDPEYSTRMDH-NAKGICPSAMGYHNQGIESYDPDKKLFFMGVNHICMDWEPFMLPYRAGQFFVGATLNMYPGPKGMLGQVKAMNAVTGKMEWEVPEKFAVWGGTLATAGDLVFYGTLDGFIKARDTRTGELKWQFQLPSGVIGHPITYQHNGKQYIAIYSGVGGWPGV--GLVFDLKDPTAGLGAVGAFRELAHYTQMGGS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4TQO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -121695 for 4878 contacts (-24.9/contact) +
2D Compatibility (PS) -56233 + (NN) -32400 + (LL) 3352
1D Compatibility (HY) -32000 + (ID) 9800
Total energy: -248776.0 ( -51.00 by residue)
QMean score : 0.516
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