Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLKGKTALVTGSTSGIGLGIALSLAEAGADLLLNGFGEVDAALAQVRARGVRAEHHPADLSSPEQIGELMAFAERTFGGVDILVNNAGIQYVAPVQEFPTERWDAIIAINLSSVFHTTRLALPGMLARGWGRIVNIASTHGLVASAGKSAYVAAKHGVLGLTKSVALETARTPVTCNAICPGWVLTPLVQKQIDARTAEGVSPEQAEHDLLAEKQPSLAFVTPEQLGGLTLFLCSEAADQVRGAAWNMDGGWVAQ
2Q2Q Chain:E ((1-255))
-TLKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRA------LQAQHDLLAEKQPSLAFVTPEHLGELVLFLCSEAGSQVRGAAWNVDGGWLAQ
General information:
TITO was launched using:
RESULT:
Template:
2Q2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -143469 for 2162 contacts (-66.4/contact) +
2D Compatibility (PS) -26708 + (NN) -8210 + (LL) 308
1D Compatibility (HY) -29200 + (ID) 9550
Total energy: -216829.0 ( -100.29 by residue)
QMean score : 0.559
(partial model without unconserved sides chains):
PDB file :
Tito_2Q2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Q2Q-query.scw
PDB file :
Tito_Scwrl_2Q2Q.pdb
: