Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIRCRNCGERPASEGHICMVCKRRSDIDPYKALIAMALLVYCGVSLAAYLKPHMPAPPPTAGSSVQPAEELAQRARQATLEQRGI
3VRH Chain:A ((270-292))
-KECKICRMP--SSGDICAFCKFWGLKKEINFKVSSTDEEPFG------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3VRH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3257 for 127 contacts (-25.6/contact) +
2D Compatibility (PS) -2441 + (NN) -1982 + (LL) 2836
1D Compatibility (HY) -1600 + (ID) 400
Total energy: -6844.0 ( -53.89 by residue)
QMean score : 0.558
(partial model without unconserved sides chains):
PDB file :
Tito_3VRH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3VRH-query.scw
PDB file :
Tito_Scwrl_3VRH.pdb
: