Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAEINIYQNPGQSLANIYKGFARQCNPGFVFPEAQTIEAWDIPLRLHPEFIPGGDISKADQQYSTLLAQEIANGVTIGFRMVNEKERVCNVEILPLLTSMAQNLDRIKARFGSGYLDRFKGSPNVYPTDVGFSTDASGGISQESGLLVSYGVN----LRTLTPGTWQAMTLPEDIKALVGPGVGLRLDAPNFSDVFNTIKSGLRYTTAVTLLLAYFAAI |
2Y9U Chain:A ((24-64)) | ---------------------------------------------------------------------------------------------------------------------------------------------------TTQGLTTIYQIEHYSMDDLASLKIPEQFRHAIWKGILDHRQLHEFS-------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y9U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -16168 for 187 contacts (-86.5/contact) +
2D Compatibility (PS) -3478 + (NN) 2425 + (LL) 9936
1D Compatibility (HY) -1600 + (ID) 200
Total energy: -9085.0 ( -48.58 by residue)
QMean score : 0.318
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