Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYAIAEDTLPARVLKELLLYRRRYPEHRQSASEADEIRRIEQVQLPRIAAFIEAGEPIEFVLPAFPAKSPNPGKVLDSRPDMAERLSLSFLNHLCQRIQLFYAPGAKITVCSDGRVFGDLVRIGDAHISAYQDALRLMIEEIGATHIGVFNLEDVRAFEAQRDNHEQLRQLLIGGYAEPLESIRETLLASEEGLLLYRAITRFLYEDGLTPDYQGSKTALQRDAKERAYGVIQRSWAWGALLADQFPRAIRLSIHPQPADSLKFGI-------HMMPTRDDWLTPWHGVAVNTEDRFVLMKRSEVLELGGELVQINGQPSHYRLPARAARRAAVA---- |
1FYE Chain:A ((1-229)) | --------------MELLLL---------SNSTLPGKAWLEHA-LPLIANQLNGRRSAVFIPFAGVTQT----------------------------------------------------------WDEYTDKTAEVLAPLG------VNVTGIHRVADPLAAIEKAEIIIVGGGN-------------------TFQLLKESRERGL-------LAPMADRVKR---GALYIGWSAGANLACPTIRTTNDMPIVDPNGFDALDLFPLQINPHFTNTREQRIRELLVV--APELTVIGLPEGNWIQVSNGQAVLGGPNTTWVFKAGEEAVALEAGHRF |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FYE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -97202 for 1723 contacts (-56.4/contact) +
2D Compatibility (PS) -21460 + (NN) -554 + (LL) 7988
1D Compatibility (HY) -6000 + (ID) 2050
Total energy: -119278.0 ( -69.23 by residue)
QMean score : 0.252
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