Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPVAHRLLFSLTALLAATAQAAVDGQKLYTQGGANPAAAACVTCHGADGMGLAAAGFPRLAGLPAAYLSKQLHDLKQGGS--------REHPVMKGIADALGDDEIQALANTLAAMPAPKPVELSRVATPRSPGETLAVRGAWERNIPECVTCHGPAGSGVGEA-FPPLQGQGEMYLSNQLRAWQLGTRRNDPNDL-MGHIAKSLSEEEIRSVSQFFATLGQAGGQP |
1ETP Chain:B ((12-189)) | --------------------------------------AVCGACHGVDGNS-PAPNFPKLAGQGERYLLKQLQDIKAGSTPGAPEGVGRKVLEMTGMLDPLSDQDLEDIAAYFSSQKG--SVGYADPALAKQ-GEKLFRGGKLDQGMPACTGCHAPNGVGNDLAGFPKLGGQHAAYTAKQLTDFREGNRTNDGDTMIMRGVAAKLSNKDIEALSSYIQGL------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ETP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -30754 for 1278 contacts (-24.1/contact) +
2D Compatibility (PS) -18174 + (NN) -9832 + (LL) 2744
1D Compatibility (HY) -9200 + (ID) 3050
Total energy: -68266.0 ( -53.42 by residue)
QMean score : 0.318
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