Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKEIINVVHGTFTQLRSLVMIFGHAFRKRDTLQYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAV-----ACPVGCISLQKAE--TEDGRWYP-EFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEFKRQDLVYEKHDLLISGPGKNPDYNYYRVAGMAIAGKPKGAAQNEAEPINVKSLLP
2XSJ Chain:E ((220-275))
-----------------------------------------------------------------NLCEIPLAVAACPVGAIRPTKKEIVTEKGETKTVNTVAIKNERCMFCGNCYTMCPS---------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2XSJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28039 for 217 contacts (-129.2/contact) +
2D Compatibility (PS) -5236 + (NN) -477 + (LL) 8364
1D Compatibility (HY) -2800 + (ID) 1150
Total energy: -29338.0 ( -135.20 by residue)
QMean score : 0.362
(partial model without unconserved sides chains):
PDB file :
Tito_2XSJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XSJ-query.scw
PDB file :
Tito_Scwrl_2XSJ.pdb
: