Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLSNAQRALIKATVPLLETGGEALITHFYRTMLGEYPEVRPLFNQAHQASGDQPRALANGVLMYARHIDQLQELGPLVAKVVNKHVSLQVLPEHYPIVGTCLLRAIREVLGEQIATDEVLEAWGAAYQQLADLLIEAEESVYAASAQADGGWRGVRRFRVARKQAESEEITSFYLEPVDGQPLLAFQPGQYIGLRLDIDGEEVR--RNYSLSAASNGREYRISVKREAGGR-----VSNYLHDRVAEGDELDLFPPAGDFVLRDSDKPLVLITAGVGITPALAMLQEALPQARP-IRFIHCARHGGVHAFRDWIEDVSAQHEQVEHFFCYSEPRAGDSADAEGLLSREKLADWLPQERDLDAYFLGPRPFMAQVKRHLADLGVPSQQCHYEFFGPAAALDA |
| 4EH1 Chain:B ((2-238)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------DGRTFVVREKQVESAYVTSFVLVPADGGAVLDYQPGQYIGIEVTPEGSDYREIRQYSLSHASNGREYRISVKREGVGSDNPGLVSHYLHNNVKVGDSVKLYAPAGDFFYVERERPVVLISAGVGATPMQAILHTLAKQNKSGVTYLYACNSAKEHTFAQETAQLIAQQGWMQQVW-YRDESADDVLQGE-----MQLAELILPIEDGDFYLCGPIGFMQYVVKQLLALGVDKARIHYEVFGPH----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EH1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -123030 for 1844 contacts (-66.7/contact) +
2D Compatibility (PS) -24872 + (NN) -14071 + (LL) 13584
1D Compatibility (HY) -20000 + (ID) 4950
Total energy: -173339.0 ( -94.00 by residue)
QMean score : 0.444
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