Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAILVIAEHNNAALAAATLNTVAAAKAI----GGDIHVLVAGQNVAAVAEAAAKVEGVSKVLVADNAAYAHQLPENVAPLIAEL-G-KNYSHVLAPATTNGKNFLPRVAALLDVDQISEIVEVVSP---DTFKRPIYAGNAIATVQSSA-AVKVITVRTTGFDAVAAEGGSAAVEQVSGPADAGKSAFVGEE-LAKSDRPELTAAKIVVSGGRGMQNGDNFKILYALADKLGAAVGASRAAVDAGFVPNDMQVGQTGKIV-APQLYIAVGISGAIQHLAGMKDSKVIVAINKDEEAPIFQVADYGLVADLFDAVPELEKAV |
| 1O97 Chain:D ((1-318)) | SKILVIAEHRRNDLRPVSLELIGAANGLKKSGEDKVVVAVIGSQADAFVPALSV-NGVDELVVVKGSSI-DFDPDVFEASVSALIAAHNPSVVLLPHSVDSLGYASSLASKTGYGFATDVYIVEYQGDELVATRGGYNQKVNVEVDFPGKSTVVLTIRPSVFKPLEGAG-SPVVSNVDAPSVQSRSQNKDYVEVG---DIDITTVDFIMSIGRGIGEETNVEQFRELADEAGATLCCSRPIADAGWLPKSRQVGQSGKVVGSCKLYVAMGISGSIQHMAGMKHVPTIIAVNTDPGASIFTIAKYGIVADIFDIEEELKAQL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1O97.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -188219 for 2488 contacts (-75.7/contact) +
2D Compatibility (PS) -32744 + (NN) -12512 + (LL) 124
1D Compatibility (HY) -19600 + (ID) 4800
Total energy: -257751.0 ( -103.60 by residue)
QMean score : 0.449
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