Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLELQEHCSLKPYNTFGIDVRARLLAHARDEADVREALALARERGLPLLVIGGGSNLLLT-RDVEALVLRMASQGRRIVSDAADSVLVEAEAGEAWDPFVQWSLERGLAGLENLSLIPGTVGAAPMQNIGAYGVELKDVFDSLTALDRQDGTLREFDRQACRFGYRDSLFKQEPDRWLILRVRLRLTRRERLHLDYGPVRQRLEEEGIASPTARDVSRVICAIRREKLPDPAVLGNAGSFFKNPLVDATQAERLRQAFPDLVGYPQADGRLKLAAGWLIDKGGWKGFRDGPVGVHAQQALVLVNHGGATGAQVRALAERIQEDVRRRFGVELEPEPNLY |
| 1HSK Chain:A ((29-312)) | --EKIKVDEPLKRYTYTKTGGNADFYITPTKNEEVQAVVKYAYQNEIPVTYLGNGSNIIIREGGIRGIVISLLS-LDHI-EVS--DDAIIAGSGAAIIDVSRVARDYALTGLEFACGIPGSIGGAVYMNAGAYGGEVKDCIDYALCVNEQ-GSLIKLTTKELELDYRNSIIQKE--HLVVLEAAFTLAPG-------------------KMTEIQAKMDDLTERRESKQPL--EYPSCGSVFQRPP--------------------------GHFAGKLIQDSNLQGHRIGGVEVSTKHAGFMVNVDNGTATDYENLIHYVQKTVKEKFGIELNREVRII |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HSK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -172166 for 2405 contacts (-71.6/contact) +
2D Compatibility (PS) -29828 + (NN) -7876 + (LL) 3284
1D Compatibility (HY) -16800 + (ID) 3600
Total energy: -226986.0 ( -94.38 by residue)
QMean score : 0.468
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