Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIRLFCSLLLALLCVSAHASFSASVDRARLTEGESVELTLESDDPTLFGKPDLSPLDALFEVLGTRQVNRLATQNGRAQATTRWIVTLLPKQSGYVAIPPISLGASSTQPIRLHVLEARDRAKSSKLAPVFIDASVDQETVYVQAQAILTLRIYHSVSLYDDSSLTPLAMNDAKVEQLGEARTYEKE-INGIRHGVIEVRYAIFPQKSGTLEIPAQAFSATLVDRGSDDYNPFGPRPGRQMRVTSPSIPLQVRPKPADYPADAPWMPARALSISESWSPQPEQAQVGESLTRNVLLKVEGLSGTQLPPLPLPDVQGLRRYPDQPQLADQSTDQGLIGSREEREALVPEQAGRIELPALEVVW-WNTREDRLERTSLPPRTLEVAAAPQAEAEPPAAALPLGERLEPTLWPWQLATAVLALTTLLGFGLWWRARQLPAVIR--AAANGPSSRSLLDEL--RRACLANDPQATRQALDAWARQQPDTLADMAARFVPLSDALDGLNGALYSESGHSWQGEDLWRAIRALPTTEQAPAGAVDNGGLPPLYPR |
| 4JY3 Chain:A ((10-379)) | -----------------------KTRRAEVAGG---------------------GFAGLTAAIALKQ--------------NGWDVRLH--------------------------------EKSSELRAF-------GAGIYLWHNGLRVLEGLGALDDVLQGSHTP-----PTYETWMHNKSVSKETFNGLPWRIMT----------------RSHLHDALVNRARA--LGVDISVNSEAVAADPVGRLTLQT--------------------------------GEVLEADLIVGADGVGS------------KVRDSIGFKQDRWVSKD-GLIRLIVPRM---KKELGHGEWDNTIDMWNFWPRVQRILYSPCNENELYLGLMAPA-ADPRGSSVPIDLEVWVEMFPFLEPCLIEAAKLKTARYDKYETTKLDSWTRGKVALVGDAAHAMCPALAQGAGCAMVNAFSLSQDLEE-GSSVEDALVAWETRIRPITDRCQALSGDYAAN--RSLSKGNMF-------TPAALEAARYDPLRRVYSWPQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JY3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -14873 for 3258 contacts (-4.6/contact) +
2D Compatibility (PS) -38027 + (NN) -11876 + (LL) 11616
1D Compatibility (HY) -16400 + (ID) 3550
Total energy: -73110.0 ( -22.44 by residue)
QMean score : 0.219
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