Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTLLTELLDELRH--------PAVRDLAWTLLA-----PPLLRRTPEPQRHPLAASRWRQEPERLAAWLREQERQPQHLAAWLA----------------------QWPRQRLGLYYEHLWQFALE---------------QAPDVRLIAANLPVRD--GGHTLGELDLLLRDDDGIHHLELAIKLYLGPQSGPGDWLGPGGQDRLSRKLEHLCRHQLPLAATR------EGRQVLAAHGAESAVSALWLSGYLFHPWPGPGSLPADIEPRHLR-GRWLRQRDWPAYLASLAGPQTGQHWLHL--------SREHWLAPAMRRQDP------LDPPRDGACWN-IAFADEARPQMLVRVV--PRDGYWVEA------ERLFLASDDWPPGLSLWGSARQAADA--------------------------- |
| 3JA7 Chain:A ((1-447)) | -NWISELIDTYRNLMNNYEVDNAVSEIVSDAIVYEDDTEVVALNLDKSKFSPKIKNMMLDEFSDVLNHLSFQRKGSDHFRRWYVDSRIFFHKIIDPKRPKEGIKELRRLDPRQVQYVYFIYDTAHESYACDGRMYEAGTKIKIPKAAVVYAHSGLVDCCGKNIIGYLHRAVKPANQLKLLEDAVVIYRITRAPDRRVWYVDTGNMPARKAAEHMQHVMNTMKNRVVYDASTGKIKNQQHNM-SMTEDYWLQRRDGKAVTEVDTLPGADNTGNMEDIRWFRQALYMALRVPLSRIPQDQQGGVMFDSGTSITRDELTFAKFIRELQHKFEEVFLDPLKTNLLLKGIITEDEWNDEINNIKIEFHRDSYFAELKEAEILERRINMLTMAEPFIGKYISHRTAMKDILQMTDEEIEQEAKQIEEESKEARFQD |
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General information:
TITO was launched using:
| RESULT:
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Template: 3JA7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -18137 for 1719 contacts (-10.6/contact) +
2D Compatibility (PS) -33330 + (NN) -6576 + (LL) 312
1D Compatibility (HY) -7600 + (ID) 3150
Total energy: -68481.0 ( -39.84 by residue)
QMean score : 0.060
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