Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNRQNGTVKWFNDAKGFGFITPESGNDLFVHFRSIQGTGFKSLQEGQKVSFVVVNGQKGLQADEVQVV
3PF4 Chain:A ((3-63))
-----EGKVKWFNSEKGFGFIEVEGQDDVFVHFSAIQGEGFKTLEEGQAVSFEIVEGNRGPQAANV---
General information:
TITO was launched using:
RESULT:
Template:
3PF4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29419 for 390 contacts (-75.4/contact) +
2D Compatibility (PS) -6395 + (NN) -2056 + (LL) 824
1D Compatibility (HY) -6400 + (ID) 1850
Total energy: -45296.0 ( -116.14 by residue)
QMean score : 0.591
(partial model without unconserved sides chains):
PDB file :
Tito_3PF4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3PF4-query.scw
PDB file :
Tito_Scwrl_3PF4.pdb
: