Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMATQGVFTLPANTRFGVTAFANSSGTQTVNVLVNNETAATFSGQSTNNAVIGTQVLNSGSSGKVQVQVSVNGRPSDLVSAQVILTNELNFALVGSEDGTDNDYNDAVVVINWPLG
2JDH Chain:D ((2-115))-ATQGVFTLPANTRFGVTAFANSSGTQTVNVLVNNETAATFSGQSTNNAVIGTQVLNSGSSGKVQVQVSVNGRPSDLVSAQVILTNELNFALVGSEDGTDNDYNDAVVVINWPLG


General information:
TITO was launched using:
RESULT:

Template: 2JDH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -43554 for 848 contacts (-51.4/contact) +
2D Compatibility (PS) -12996 + (NN) -10150 + (LL) 208
1D Compatibility (HY) -14000 + (ID) 5700
Total energy: -86192.0 ( -101.64 by residue)
QMean score : 0.693

(partial model without unconserved sides chains):
PDB file : Tito_2JDH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2JDH-query.scw
PDB file : Tito_Scwrl_2JDH.pdb: