Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPKSFRHLVQALACLALLASASLQAQESRLDRILESGVLRVATTGDYKPFSYRTEEGGYAGFDVDMAQRLAESLGAKLVVVPTSWPNLMRDFADDRFDIAMSGISINLERQRQAYFSIPYLRDGKTPITLCSEEARFQTLEQIDQPGVTAIVNPGGTNEKFARANLKKARILVHPDNVTIFQQIVDGKADLMMTDAIEARLQSRLHPELCAVHPQQPFDFAEKAYLLP-RDEAFKRYVDQWLHIAEQSGLLRQRMEHWLEYRWPTAHGK
3VV5 Chain:A ((24-259))------------------------FQVRSFEEIKRSGEIRIGTEGAFPPFNYFDERNQLTGFEVDLGNAIAERLGLKPRWIAQSFDTLLIQLNQGRFDFVIASHGITEERARAVDFTNPHYCTGGVIVSRKGG---PRTAKDLQ--GKVVGVQVGTTYMEAAQKIPGIKEVRTYQRDPDALQDLLAGRIDTWITDRFVAKEAIKERKLENTLQVGELVFQERVAMAVAKGNKSLLDALNRALAELMQDGTYARISQKWFGEDVRC----


General information:
TITO was launched using:
RESULT:

Template: 3VV5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -99200 for 2010 contacts (-49.4/contact) +
2D Compatibility (PS) -26553 + (NN) -12812 + (LL) 2996
1D Compatibility (HY) -4800 + (ID) 2450
Total energy: -142819.0 ( -71.05 by residue)
QMean score : 0.424

(partial model without unconserved sides chains):
PDB file : Tito_3VV5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3VV5-query.scw
PDB file : Tito_Scwrl_3VV5.pdb: