Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRFMALALCFVLPTAAHAASLKDFELSKMLEKVAKESSVGTPRAINEDILDQGYTVEGNQLINHLSVRASHAERMRSNPDSVRSQLGDSVCSNTGYRQLLARGAILTYSFTEYKTNQPVATERFDAGSCRIQGKK
4FTF Chain:A ((1-109))
-----------------GAMAEKQRNLELLAGNRASLLSTELPLEFGPLNILRATAKGS---TVELMMVYNTDANNAKPTEQVLQSAVSSFCANKDIRSNLDVGISYRIQMRN-TRGQLMADQLVTKESC------
General information:
TITO was launched using:
RESULT:
Template:
4FTF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13825 for 749 contacts (-18.5/contact) +
2D Compatibility (PS) -11363 + (NN) -3532 + (LL) 2704
1D Compatibility (HY) -1600 + (ID) 900
Total energy: -28516.0 ( -38.07 by residue)
QMean score : 0.389
(partial model without unconserved sides chains):
PDB file :
Tito_4FTF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4FTF-query.scw
PDB file :
Tito_Scwrl_4FTF.pdb
: