Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNAADRVMQSYGRCCASTGFFDDFYRHFLASSPQIRAKFATT-DM------------TAQKHLLRAGIMNLVMYARGMSDSKLRALGASH-SRAALDIRPELYDLWLDALLMAVAEHD-R-DCDAETRDAWRDVMGRGIAVIKSYY
3BOM Chain:B ((6-146))
-AERSAIVGLWGKISV-DEIGPQALARLLIVSPWTQRHFSTFGNLSTPAAIMGNPAVAKHGKTVMHGLDRAVQNLDDI-KNTYVTLSVMHSEK--LFVDPDNFRLLADCITVCVAAKLGPAVFSADTQEAFQKFLAVVVSALGRQY
General information:
TITO was launched using:
RESULT:
Template:
3BOM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -68344 for 897 contacts (-76.2/contact) +
2D Compatibility (PS) -13340 + (NN) -4984 + (LL) 440
1D Compatibility (HY) -6800 + (ID) 1000
Total energy: -94028.0 ( -104.82 by residue)
QMean score : 0.516
(partial model without unconserved sides chains):
PDB file :
Tito_3BOM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BOM-query.scw
PDB file :
Tito_Scwrl_3BOM.pdb
: