Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIAAYQARCQARVDAALDALFVAPREELQRLYEAMRYSVMNGGKRVRPLLAYAACEALGGAPQRADAAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDEATAILAADGLQALAFE-VLADTRRNPQEHAVCLEMLTRLARAAGSAGMVGGQAIDLGSVG---VALDQAALEVMHRHKTGALIEASVRLGALASGRAEPASLAALERYAEAIGLAFQVQDDILDVESDTATLGKTQGKDQAHNKPTYPALLGLEAAKGYALELRDLALAALDGFPPS-ADPLRQLARYIVERRN |
3KRP Chain:D ((7-295)) | ----YMLRKAKSVNKALEAA-VQMKEPL-KIHESMRYSLLAGGKRVRPMLCIAACELVGGDESTAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHMAFGESVAVLAGDALLSFAFEHVAAATKGAPPERIV--RVLGELAVSIGSEGLVAGQVVDVCSEGMAEVGLDH--LEFIHHHKTAALLQGSVVLGAILGGGKEE-EVAKLRKFANCIGLLFQVVDDILDVTKSSKELGK-----------TYPKLIGVEKSKEFADRLNREAQEQLLHFHPHRAAPLIALANYIAYRDN |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3KRP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -130892 for 2314 contacts (-56.6/contact) +
2D Compatibility (PS) -31095 + (NN) -32112 + (LL) 1756
1D Compatibility (HY) -26000 + (ID) 7100
Total energy: -225443.0 ( -97.43 by residue)
QMean score : 0.538
|
|
|