Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEFSWSEILLELLAVAVLFFGVHWSLRHAKTLDQASMLPFADDEEVARRVERETGRSRTGCGCPGRCQGDCRHWDKNWPA
1RQT Chain:A ((1-37))
------------------------SITKDQIIEAVAAMSVMDVVELISAMEEKFGVSAAAA-------------------
General information:
TITO was launched using:
RESULT:
Template:
1RQT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 7285 for 153 contacts (47.6/contact) +
2D Compatibility (PS) -4264 + (NN) -2309 + (LL) 3016
1D Compatibility (HY) -1600 + (ID) 300
Total energy: 1828.0 ( 11.95 by residue)
QMean score : 0.484
(partial model without unconserved sides chains):
PDB file :
Tito_1RQT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1RQT-query.scw
PDB file :
Tito_Scwrl_1RQT.pdb
: