Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKGNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPKAGLPLHLIQVS--GLR-GKG--LK-S----LVKAPLELLKSLFQALRVIRQLRPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQNAVA----GTA-NRSLA-----------------------PIARR-----------VCEAFPDTFP-A----SDKRLTTGNPVRGELFLDAHARAPLTGRRVNLLV-LGGSLGAEPLNKLLPEALAQVPLEIRPAIRHQAGRQHAE-ITAERYRTVAVEADVAPFISDMAAAYAWADLVICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVRSGAGRLLPQKSTGAAELAAQLSEVLMHPETLRSMADQARSLAKPEATRTVVDACLEVARG |
| 3IA7 Chain:A ((4-398)) | -QRHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPL--FADEVKAAGAEVVLYKSEFDTFHVPEVVKQEDAETQLHLVYVRENVAILRAAEEALGDNPPDLVVYDV-FPFIAGRLLAARWDRPAVRLTGGFAANEHYSLFKELWKSNGQRHPADVEAVHSVLVDLLGKYGVDTPVKEYWDEIEGLTIVFLPKSFQPFAETFDERFAFVGPTLTG------PGWQPPRPDAPVLLVSLGNQ-F-NEHPEFFRACAQAFAD-TPWHVVMAIGGFLDPAVLG----PLPPNVEAHQWIP-FHSVLAHARACLTHGTTGAVLEAFAAGVPLVLVPHF---ATEAAPSAERVIELGLGSVLRPDQLEPASIREAVERLAADSAVRERVRRMQRDILSSGGPARAADEVEAYLG- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3IA7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -180921 for 2758 contacts (-65.6/contact) +
2D Compatibility (PS) -35960 + (NN) -12015 + (LL) 1688
1D Compatibility (HY) -7200 + (ID) 2900
Total energy: -237308.0 ( -86.04 by residue)
QMean score : 0.462
|
|
|