Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIRLEQILTPGRSLVNVPGGSKKRVLEQIANLVARELPEFDAQTIFENLVAR-EKLGST-GFGNGIAIPHCRLS-GCQSPISAVLHLDAPVDFDALDGAPVDLLFVLLVPEAATEEHLELLRQIAAMLDRADVRDRLRSAPTAEALYQIVVDVQNGQ
3OXP Chain:A ((4-149))
--MLKTLLTSDVIQVVSQAKDWRDAIAISCQPLIDN--GAVEARYVEAIYRSHEAIGPYYVVGPGIAMPHARPEDGVNRLSLALTVITEGVTFNAEGNDPVKLLIVLAATD--SNSHIEAISQLAQLFDTASDVQALLNAKTPQDILSVIAR-----
General information:
TITO was launched using:
RESULT:
Template:
3OXP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -95424 for 1104 contacts (-86.4/contact) +
2D Compatibility (PS) -16496 + (NN) -15924 + (LL) 916
1D Compatibility (HY) -7600 + (ID) 1700
Total energy: -136228.0 ( -123.39 by residue)
QMean score : 0.566
(partial model without unconserved sides chains):
PDB file :
Tito_3OXP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OXP-query.scw
PDB file :
Tito_Scwrl_3OXP.pdb
: