Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTAALPDLSFHPAWHAQLELAYARAGDATRPVTRRHAGPLRVQKHLYAEGPEVCQHILVHPPGGIAGGDSLAFDVRLGERAWAQLTSPGAAKWYRAACPARQTLEIHLEPGATLEWLPQESIVFAGAQAELETRIQLRGDARLFYWDMVALGRPASGERFASGHFVAALDIRRDDRLLWHERQRIDGGDRLLDSPIGLAGHPVLATLVASGEIDTDLLQRCRALPCAGRGNLSQLPGGLLVARCLADEALHARAWLIELWRLLRPALLGREAVPPRIWST |
| 3K8R Chain:A ((24-84)) | --------------------------------------------------------------------------------------EPRAAKARYD--RSSARVIVDLENGCTFAFPPRLAQGLEGASDDQLCAVEILGQGYGLHWETL----------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3K8R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -16644 for 365 contacts (-45.6/contact) +
2D Compatibility (PS) -6408 + (NN) -1697 + (LL) 14424
1D Compatibility (HY) -800 + (ID) 650
Total energy: -11775.0 ( -32.26 by residue)
QMean score : 0.101
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