Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLRKLAAVSLLSLLSAPLLAAECSVDIQGNDQMQFNTNAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKDSVTFDVSKLKEGEQYMFFCTFPGHSALMKGTLTLK
4HZ1 Chain:D ((1-128))
--------------------AECSVDIQGNDQMQFNTNAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKDSVTFDVSKLKEGEQYMFFCTFPGHSALMKGTLTLK
General information:
TITO was launched using:
RESULT:
Template:
4HZ1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -65993 for 964 contacts (-68.5/contact) +
2D Compatibility (PS) -13722 + (NN) -4943 + (LL) 2324
1D Compatibility (HY) -16800 + (ID) 6400
Total energy: -105534.0 ( -109.48 by residue)
QMean score : 0.579
(partial model without unconserved sides chains):
PDB file :
Tito_4HZ1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4HZ1-query.scw
PDB file :
Tito_Scwrl_4HZ1.pdb
: