Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLIIPAIDLKDGACVRLRQGLMEDATVFSDDPVAMAAKWVDGGCRRLHLVDLNGAFEGKPVNGEVVTAIARRYPDLPIQIGGGIRSLETIEHYVRAGVSYVIIGTKAVKQPEFVGEACRAFPGK-VIVGLDAKD---GF-VATDGWAEVSEVQVIDLARRFEADGVSAIVYTDISKDGMMQGCNVEATAALANATRIPVIASGGIHNLGDIQKLLDARTPGIIGAITGRAIYEGTLDVAEAQALCDNFKA
4EVZ Chain:B ((6-240))
--IIPCLDVKDG---RVVKGVNFENLRDAGDPVELAARYDEEGADELVFLDIT----GRETMLEVVERTAEQVF-IPLTVGGGIRSVEDASRLLRAGADKVSINTAAVKNPELITEAAEEFGSQAVVVAIDAKRVGGGWEVFTHGGRKPTGLDAVEWARKVVELGAGEILLTSMDRDGTKAGYDLELTRAVSEAVSVPVIASGGAGELEHFAEVFE--LEGADAALAASIFHFGEITIREVKA-------
General information:
TITO was launched using:
RESULT:
Template:
4EVZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -181738 for 1980 contacts (-91.8/contact) +
2D Compatibility (PS) -24481 + (NN) -8654 + (LL) 1568
1D Compatibility (HY) -14000 + (ID) 3900
Total energy: -231205.0 ( -116.77 by residue)
QMean score : 0.681
(partial model without unconserved sides chains):
PDB file :
Tito_4EVZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4EVZ-query.scw
PDB file :
Tito_Scwrl_4EVZ.pdb
: