Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTPEGFNGAVLDWYDRHGRKDLPWQQGITPYRVWVSEIMLQQTQVSTVLGYFDRFMAALPDVEALAAAAEDEVLHLWTGLGYYSRARNLHKTAQIVVERHAGEFPRDVEQLAELPGIGRSTAGAIASLSMGLRAPILDGNVKRVLARYLAQDGYPGEPKVARALWEAAERFTPHARVNHYTQAMMDLGATLCTRSKPSCLLCPLVSGCRAHLLGREADYPQPKPRKALPQKRTLMPILANRDGAILLYRRPSSGLWGGLWSLPELDDLDGLEPLAARHSLALGERRELSGLTHTFSHFQLAIEPWLVAVEGAPRAVAEGDWLWYNLATPPRLGLAAPVKKLLKRAEQELGRGTAA |
1KG2 Chain:A ((1-224)) | MQASQFSAQVLDWYDKYGRKTLPWQIDKTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYARARNLHKAAQQVATLHGGKFPETFEEVAALPGVGRSTAGAILSLSLGKHFPILDGNVKRVLARCYAVSGWPGKKEVENKLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSLCPLQNGCIAAANNSWALYPGKKP----------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KG2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -133589 for 1764 contacts (-75.7/contact) +
2D Compatibility (PS) -23799 + (NN) -13946 + (LL) 8700
1D Compatibility (HY) -23600 + (ID) 6850
Total energy: -193084.0 ( -109.46 by residue)
QMean score : 0.584
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