Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNVLIVDDEPLARERLARLVGQLDGYRVLEPSASNGEEALTLIDSLKPDIVLLDIRMPGLDGLQVAARLCEREAPPAVIFCTAHDEFAL--EAFQVSAVGYLVKPVRSEDLAEALKKASRPNRVQLAALTKPPASGGSGPRSHISARTRKGIELIPLEEVIFFIADHKYVTLRHAQGEVLLDEPLKALEDEFGERFVRIHRNALVARERIERLQRTPLGHFQLYLKGLDGDALTVSRRHVAGVRRLMHQL
1SRR Chain:C ((6-117))
--ILIVDDQSGIRILLNEVFNK-EGYQTFQ--AANGLQALDIVTKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVIIMTAYGELDMIQESKELGALTHFAKPFDIDEIRDAVKK-------------------------------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1SRR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -98357 for 847 contacts (-116.1/contact) +
2D Compatibility (PS) -12365 + (NN) -11236 + (LL) 10060
1D Compatibility (HY) -10800 + (ID) 1850
Total energy: -124548.0 ( -147.05 by residue)
QMean score : 0.733
(partial model without unconserved sides chains):
PDB file :
Tito_1SRR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SRR-query.scw
PDB file :
Tito_Scwrl_1SRR.pdb
: