Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSERAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADDGRSYSKPMLSTGFSKNKDADGLAMAEPGAMAEQLNARILTHTRVTGIDPGHQRIWIG------EEEVRYRDLVLAWGAEPIRVPVEGDAQDALYPINDLEDYARFRQAA--AGKRRVLLLGAGLIGCEFANDLSS-GGYQLDVVAPCEQVMPGLLHPAAAKAVQAGLEGLGVRFHLGPVLASLKKAGEGLEAHLSDGEVIPCDLVVSAVGLRPRTELAFAAGLAVN--RGIVVDRSLRTSHANIYALGDCAEVDGL------NLLYVMPLMACARALAQTLAGNPSQVAYGPMPVTVKTPACPLVVSPPPRGMDGQW-----L-----VEGSGTDLKVLCRD-TAGRVIGYALT---GAAVNEKLALNKELPGLMA |
| 3IWA Chain:A ((4-429)) | ----KHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQA------------------------------------VEALVETRAHAIDRAAHTVEIENLRTGERRTLKYDKLVLALGSKANRPPVEGMDLAGVTPVTNLDEAEFVQHAISAGEVSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPGFTSKSLSQMLRHDLEKNDVVVHTGEKVVRLEGENGKVARVITDKRTLDADLVILAAGVSPNTQLARDAGLELDPRGAIIVDTRMRTSDPDIFAGGDCVTIPNLVTGKPGFFPLGSMANRQGRVIGTNLADGDATFPGAVGSWAVKLFEGSASGAGLTVEGALREGYDAVNVHVEQ-----IMTLQLVVDRPTRRVLGIQGFSTLGDALTARINAVAT------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IWA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -286704 for 2873 contacts (-99.8/contact) +
2D Compatibility (PS) -36406 + (NN) -15825 + (LL) 2000
1D Compatibility (HY) -14000 + (ID) 4350
Total energy: -355285.0 ( -123.66 by residue)
QMean score : 0.447
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